BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020F08SP1|AL427654
(959 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1128 1871 0.0
>3x_Contig1128
Length = 4759
Score = 1871 bits (943), Expect = 0.0
Identities = 957/959 (99%), Gaps = 2/959 (0%)
Strand = Plus / Plus
Query: 1 ccatgcaacggtttccataatagagatgagcttgtcggacttgtagtagatatgttcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1566 ccatgcaacggtttccataatagagatgagcttgtcggacttgtagtagatatgttcaag 1625
Query: 61 tcttctgttgaagacacgggccaaaagtctatcgcggtgttcttctgcagttacacgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1626 tcttctgttgaagacacgggccaaaagtctatcgcggtgttcttctgcagttacacgttc 1685
Query: 121 aaagtacaattgggatctgataatcaaattgtaaatagattgttcatctctcaaacgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1686 aaagtacaattgggatctgataatcaaattgtaaatagattgttcatctctcaaacgttc 1745
Query: 181 catgtattcactggaacgagtgtcaatgttcaaaagggatttgctaaattcatcgtccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1746 catgtattcactggaacgagtgtcaatgttcaaaagggatttgctaaattcatcgtccaa 1805
Query: 241 tctttcaaccatagagaagatagaacccaaaatttccttgacaccatgctcattagcttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1806 tctttcaaccatagagaagatagaacccaaaatttccttgacaccatgctcattagcttc 1865
Query: 301 tggttcatcttcaatgaaatcatttcttggggcaaattcagtaacttgatagtggtcgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1866 tggttcatcttcaatgaaatcatttcttggggcaaattcagtaacttgatagtggtcgat 1925
Query: 361 ctcttgttccagcacttccaataaaccatccaagttatcctttgatgctttccattgttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1926 ctcttgttccagcacttccaataaaccatccaagttatcctttgatgctttccattgttc 1985
Query: 421 tagtggttggtatgataaggatacagatgcatcg-aatctgattggaatcaagttcaagt 479
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1986 tagtggttggtatgataaggatacagatgcatcgtaatctgattggaatcaagttcaagt 2045
Query: 480 atgtacagatcttttcatatggagtcttggcaatcttcaatagttcttcggtggttttaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2046 atgtacagatcttttcatatggagtcttggcaatcttcaatagttcttcggtggttttaa 2105
Query: 540 tttgttctgtgtggtcagtgtttttcttacctctagaatcgatgataatattcaacgtct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2106 tttgttctgtgtggtcagtgtttttcttacctctagaatcgatgataatattcaacgtct 2165
Query: 600 tgaaaaagtctagctcagaaatgttatttgccacggatgccaagtctaaattcttcttac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2166 tgaaaaagtctagctcagaaatgttatttgccacggatgccaagtctaaattcttcttac 2225
Query: 660 cactcaaggagaatggagtagcagagacatctcttgagtctatatcagcatctaagacag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2226 cactcaaggagaatggagtagcagagacatctcttgagtctatatcagcatctaagacag 2285
Query: 720 gttccttgtcaaagtcctctgggttttctctgtaagccttaacggaggtttcgttttctc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2286 gttccttgtcaaagtcctctgggttttctctgtaagccttaacggaggtttcgttttctc 2345
Query: 780 tgattaacttcttaactctttgcttggtggtgttataagctcttgcaactgccttattct 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2346 tgattaacttcttaactctttgcttggtggtgttataagctcttgcaactgccttattct 2405
Query: 840 taatttcatcctgagaagtagcagataccgcatcttcaaatctagccaatgacttcacaa 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2406 taatttcatcctgagaagtagcagataccgcatcttcaaatctagccaatgacttcacaa 2465
Query: 900 agatattaggtgtaccgtagttttgttgttgggcttttgtgtataa-ttcaaaatggtt 957
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2466 agatattaggtgtaccgtagttttgttgttgggcttttgtgtataatttcaaaatggtt 2524
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8180
Number of Sequences: 1807
Number of extensions: 8180
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 959
length of database: 10,358,551
effective HSP length: 16
effective length of query: 943
effective length of database: 10,329,639
effective search space: 9740849577
effective search space used: 9740849577
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)